STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE72092.1Predicted oxidoreductase. (288 aa)    
Predicted Functional Partners:
SCE89468.1
Predicted oxidoreductase.
  
  
 
0.641
SCF40420.1
Predicted oxidoreductase.
  
  
 
0.631
SCE72082.1
Transcriptional regulator, contains XRE-family HTH domain.
       0.521
SCF18414.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
     
 0.516
SCE66305.1
Predicted oxidoreductase.
 
     0.457
SCF29292.1
Aldo/keto reductase.
  
 
0.436
SCE65292.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.418
SCE94921.1
Aldo/keto reductase.
  
 
0.402
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.