STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE80212.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
SCF03335.1
Phage shock protein A (PspA) family protein.
  
     0.680
SCE80197.1
DNA-binding transcriptional regulator, PadR family; Manually curated.
       0.626
SCF25575.1
Transcriptional regulator, TetR family.
  
     0.625
SCF31929.1
DNA-binding transcriptional regulator of glucitol operon.
  
     0.613
SCE80184.1
Myo-inositol-1-phosphate synthase.
       0.549
SCF39584.1
Protein of unknown function (DUF5051); Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.541
SCF31132.1
TLP18.3, Psb32 and MOLO-1 founding protein of phosphatase.
  
     0.517
SCF20874.1
TIGR03083 family protein.
  
     0.509
SCF42066.1
Hypothetical protein.
  
     0.484
SCE95697.1
Dynamin family protein.
  
     0.475
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.