STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE86628.1Putative ABC transport system permease protein. (824 aa)    
Predicted Functional Partners:
SCF42437.1
Putative ABC transport system ATP-binding protein.
 
 
 0.820
SCE92939.1
Putative ABC transport system ATP-binding protein.
 
 
 0.806
SCF38081.1
Putative ABC transport system ATP-binding protein.
 
 
 0.741
SCF28434.1
Putative ABC transport system ATP-binding protein.
 
 
 0.740
SCE65462.1
Putative ABC transport system ATP-binding protein.
 
 
 0.723
SCE86607.1
Signal transduction histidine kinase.
  
    0.480
SCE86617.1
Two component transcriptional regulator, LuxR family.
       0.477
SCF29780.1
Hydroxyneurosporene synthase (CrtC).
  
    0.454
SCE72891.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
  
     0.431
SCF21440.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
  
     0.429
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.