STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE87305.1FHA domain-containing protein. (150 aa)    
Predicted Functional Partners:
SCF33239.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.983
SCE79019.1
Serine/threonine protein kinase.
 
 
 
 0.982
SCF39698.1
Serine/threonine protein kinase.
 
 
 
 0.979
SCF32290.1
Glutamate dehydrogenase.
    
 
 0.950
SCE79199.1
PASTA domain-containing protein.
   
 
 0.937
SCE87316.1
MerR family regulatory protein.
 
    0.890
SCE69322.1
Serine/threonine protein kinase.
  
 
 
 0.858
SCE79030.1
Serine/threonine protein kinase.
  
 
 
 0.851
SCF22129.1
Serine/threonine protein kinase.
  
 
 
 0.850
SCF28796.1
Serine/threonine protein kinase.
  
 
 
 0.850
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.