Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCE65236.1 | SCE82014.1 | GA0070561_0581 | GA0070561_1898 | Pectate lyase. | Lysophospholipase L1. | 0.733 |
SCE65236.1 | SCE82059.1 | GA0070561_0581 | GA0070561_1901 | Pectate lyase. | Ricin-type beta-trefoil lectin domain-like. | 0.734 |
SCE65236.1 | SCE93063.1 | GA0070561_0581 | GA0070561_2517 | Pectate lyase. | Endo-1,4-beta-xylanase (glycosyl hydrolase family 10). | 0.607 |
SCE65236.1 | SCE93075.1 | GA0070561_0581 | GA0070561_2518 | Pectate lyase. | Esterase, PHB depolymerase family. | 0.769 |
SCE65236.1 | SCE98969.1 | GA0070561_0581 | GA0070561_2955 | Pectate lyase. | Poly(3-hydroxybutyrate) depolymerase. | 0.635 |
SCE65236.1 | SCF08112.1 | GA0070561_0581 | GA0070561_3434 | Pectate lyase. | Endo-1,4-beta-xylanase (glycosyl hydrolase family 10). | 0.626 |
SCE65236.1 | SCF09096.1 | GA0070561_0581 | GA0070561_3509 | Pectate lyase. | Beta-xylosidase. | 0.720 |
SCE65236.1 | SCF09783.1 | GA0070561_0581 | GA0070561_3559 | Pectate lyase. | Lysophospholipase L1. | 0.726 |
SCE65236.1 | SCF29865.1 | GA0070561_0581 | GA0070561_5141 | Pectate lyase. | Endo-1,4-beta-xylanase. | 0.624 |
SCE65236.1 | SCF37403.1 | GA0070561_0581 | GA0070561_5928 | Pectate lyase. | Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.759 |
SCE82014.1 | SCE65236.1 | GA0070561_1898 | GA0070561_0581 | Lysophospholipase L1. | Pectate lyase. | 0.733 |
SCE82014.1 | SCE82059.1 | GA0070561_1898 | GA0070561_1901 | Lysophospholipase L1. | Ricin-type beta-trefoil lectin domain-like. | 0.750 |
SCE82014.1 | SCE93063.1 | GA0070561_1898 | GA0070561_2517 | Lysophospholipase L1. | Endo-1,4-beta-xylanase (glycosyl hydrolase family 10). | 0.564 |
SCE82014.1 | SCE93075.1 | GA0070561_1898 | GA0070561_2518 | Lysophospholipase L1. | Esterase, PHB depolymerase family. | 0.765 |
SCE82014.1 | SCF09096.1 | GA0070561_1898 | GA0070561_3509 | Lysophospholipase L1. | Beta-xylosidase. | 0.736 |
SCE82014.1 | SCF37403.1 | GA0070561_1898 | GA0070561_5928 | Lysophospholipase L1. | Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.728 |
SCE82059.1 | SCE65236.1 | GA0070561_1901 | GA0070561_0581 | Ricin-type beta-trefoil lectin domain-like. | Pectate lyase. | 0.734 |
SCE82059.1 | SCE82014.1 | GA0070561_1901 | GA0070561_1898 | Ricin-type beta-trefoil lectin domain-like. | Lysophospholipase L1. | 0.750 |
SCE82059.1 | SCE93063.1 | GA0070561_1901 | GA0070561_2517 | Ricin-type beta-trefoil lectin domain-like. | Endo-1,4-beta-xylanase (glycosyl hydrolase family 10). | 0.791 |
SCE82059.1 | SCE93075.1 | GA0070561_1901 | GA0070561_2518 | Ricin-type beta-trefoil lectin domain-like. | Esterase, PHB depolymerase family. | 0.740 |
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