STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE95980.1Signal transduction histidine kinase. (431 aa)    
Predicted Functional Partners:
SCE95996.1
Two component transcriptional regulator, LuxR family.
 
  0.955
SCE95969.1
CubicO group peptidase, beta-lactamase class C family.
 
     0.800
SCE75789.1
Signal transduction histidine kinase.
  
  0.738
SCF09972.1
Histidine kinase.
  
  
  0.718
SCF09958.1
Two component transcriptional regulator, LuxR family.
  
  0.698
SCF38056.1
Two component transcriptional regulator, LuxR family.
  
  0.687
SCF38065.1
Signal transduction histidine kinase.
  
  
  0.684
SCF20411.1
Two component transcriptional regulator, LuxR family.
  
  0.674
SCF28442.1
Two component transcriptional regulator, LuxR family.
  
  0.672
SCF36312.1
Signal transduction histidine kinase.
  
  
  0.661
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.