STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF03564.1Hemolysin, contains CBS domains. (451 aa)    
Predicted Functional Partners:
SCF03576.1
Hemolysin, contains CBS domains.
 
   
0.924
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.752
SCE78901.1
Hemolysin, contains CBS domains.
 
   
0.586
SCF03587.1
Sporulation-control protein spo0M.
       0.508
SCF03491.1
Multisubunit sodium/proton antiporter, MrpA subunit /multisubunit sodium/proton antiporter, MrpB subunit.
       0.446
SCF03504.1
Multisubunit sodium/proton antiporter, MrpC subunit.
  
    0.444
SCF03517.1
Multisubunit sodium/proton antiporter, MrpD subunit.
       0.439
SCF03526.1
Multisubunit sodium/proton antiporter, MrpE subunit.
       0.439
SCF03538.1
Multisubunit sodium/proton antiporter, MrpF subunit.
       0.439
SCF03553.1
Multisubunit sodium/proton antiporter, MrpG subunit.
       0.439
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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