STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF03768.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (291 aa)    
Predicted Functional Partners:
SCF03754.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.992
SCF03743.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.980
SCF03783.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.975
SCE64004.1
Glutamate transport system permease protein.
 
 0.972
SCE64014.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.947
SCE63989.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.940
SCF10152.1
Polar amino acid transport system permease protein.
 
  0.907
SCF37251.1
Polar amino acid transport system permease protein.
 
  0.907
SCF40557.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.902
SCF37244.1
Polar amino acid transport system ATP-binding protein.
 
 0.900
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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