STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF09392.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
SCF09381.1
Hypothetical protein.
    
  0.759
SCF03859.1
Endoglucanase.
    
  0.725
SCE79119.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.710
SCF41535.1
Peptidase family S41.
   
  0.537
SCF29468.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.463
SCE67750.1
Hypothetical protein.
    
   0.459
SCF09868.1
Pectate lyase superfamily protein.
   
  0.450
SCE77063.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
    
  0.443
SCF09405.1
Protein of unknown function (DUF4331).
       0.442
SCF03219.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.406
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.