STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF13678.1Response regulator of citrate/malate metabolism. (231 aa)    
Predicted Functional Partners:
SCF13689.1
Two-component system, CitB family, sensor kinase.
 
 0.997
SCF13701.1
Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.826
SCE75789.1
Signal transduction histidine kinase.
    
 0.816
SCF38351.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
 0.781
SCE70474.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.583
SCF38360.1
Response regulator receiver domain-containing protein.
     
 0.547
SCE81353.1
Two component transcriptional regulator, LytTR family.
  
  
0.546
SCF36016.1
Signal transduction histidine kinase.
    
 0.531
SCF25832.1
Cellulose binding domain-containing protein.
     
 0.510
SCF33177.1
Two-component system, OmpR family, sensor kinase.
    
  0.455
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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