Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCE71274.1 | SCF18879.1 | GA0070561_1050 | GA0070561_4097 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Hypothetical protein. | 0.521 |
SCE71274.1 | SCF42187.1 | GA0070561_1050 | GA0070561_6557 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.733 |
SCE71274.1 | guaB | GA0070561_1050 | GA0070561_5672 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.472 |
SCE79475.1 | SCF18879.1 | GA0070561_1707 | GA0070561_4097 | Hypothetical protein. | Hypothetical protein. | 0.414 |
SCE81863.1 | SCF18879.1 | GA0070561_1885 | GA0070561_4097 | Ferric iron reductase FhuF-like transporter. | Hypothetical protein. | 0.644 |
SCF09199.1 | SCF18879.1 | GA0070561_3517 | GA0070561_4097 | WD40-like Beta Propeller Repeat. | Hypothetical protein. | 0.414 |
SCF18879.1 | SCE71274.1 | GA0070561_4097 | GA0070561_1050 | Hypothetical protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.521 |
SCF18879.1 | SCE79475.1 | GA0070561_4097 | GA0070561_1707 | Hypothetical protein. | Hypothetical protein. | 0.414 |
SCF18879.1 | SCE81863.1 | GA0070561_4097 | GA0070561_1885 | Hypothetical protein. | Ferric iron reductase FhuF-like transporter. | 0.644 |
SCF18879.1 | SCF09199.1 | GA0070561_4097 | GA0070561_3517 | Hypothetical protein. | WD40-like Beta Propeller Repeat. | 0.414 |
SCF18879.1 | SCF33820.1 | GA0070561_4097 | GA0070561_5533 | Hypothetical protein. | ATP-dependent DNA helicase, Rep family; Manually curated. | 0.457 |
SCF18879.1 | SCF39087.1 | GA0070561_4097 | GA0070561_6109 | Hypothetical protein. | Hypothetical protein. | 0.469 |
SCF18879.1 | SCF42187.1 | GA0070561_4097 | GA0070561_6557 | Hypothetical protein. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.608 |
SCF18879.1 | guaB | GA0070561_4097 | GA0070561_5672 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.473 |
SCF33820.1 | SCF18879.1 | GA0070561_5533 | GA0070561_4097 | ATP-dependent DNA helicase, Rep family; Manually curated. | Hypothetical protein. | 0.457 |
SCF33820.1 | SCF42187.1 | GA0070561_5533 | GA0070561_6557 | ATP-dependent DNA helicase, Rep family; Manually curated. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.568 |
SCF33820.1 | guaB | GA0070561_5533 | GA0070561_5672 | ATP-dependent DNA helicase, Rep family; Manually curated. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.444 |
SCF39087.1 | SCF18879.1 | GA0070561_6109 | GA0070561_4097 | Hypothetical protein. | Hypothetical protein. | 0.469 |
SCF42187.1 | SCE71274.1 | GA0070561_6557 | GA0070561_1050 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.733 |
SCF42187.1 | SCF18879.1 | GA0070561_6557 | GA0070561_4097 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein. | 0.608 |
page 1 of 2