STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF21761.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
SCF21738.1
Hypothetical protein.
 
 
 0.990
SCF21748.1
Protein of unknown function (DUF742).
 
  
 0.984
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
    
 0.970
SCF21730.1
Signal transduction histidine kinase.
 
     0.965
SCF25670.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
 
 
 0.927
SCF32205.1
Hypothetical protein.
 
 
 0.927
SCE69586.1
Hypothetical protein.
 
 
 0.924
SCF18315.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
 
 
 0.924
SCF26897.1
Hypothetical protein.
 
 
 0.924
SCF36993.1
Hypothetical protein.
 
 
 0.924
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.