Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCF18524.1 | SCF22351.1 | GA0070561_4057 | GA0070561_4426 | ATPase components of ABC transporters with duplicated ATPase domains. | Putative stress-induced transcription regulator. | 0.415 |
SCF22338.1 | SCF22351.1 | GA0070561_4425 | GA0070561_4426 | Threonine/homoserine efflux transporter RhtA. | Putative stress-induced transcription regulator. | 0.906 |
SCF22338.1 | SCF40153.1 | GA0070561_4425 | GA0070561_6272 | Threonine/homoserine efflux transporter RhtA. | Uncharacterized membrane protein YczE. | 0.431 |
SCF22351.1 | SCF18524.1 | GA0070561_4426 | GA0070561_4057 | Putative stress-induced transcription regulator. | ATPase components of ABC transporters with duplicated ATPase domains. | 0.415 |
SCF22351.1 | SCF22338.1 | GA0070561_4426 | GA0070561_4425 | Putative stress-induced transcription regulator. | Threonine/homoserine efflux transporter RhtA. | 0.906 |
SCF22351.1 | SCF40153.1 | GA0070561_4426 | GA0070561_6272 | Putative stress-induced transcription regulator. | Uncharacterized membrane protein YczE. | 0.477 |
SCF40153.1 | SCF22338.1 | GA0070561_6272 | GA0070561_4425 | Uncharacterized membrane protein YczE. | Threonine/homoserine efflux transporter RhtA. | 0.431 |
SCF40153.1 | SCF22351.1 | GA0070561_6272 | GA0070561_4426 | Uncharacterized membrane protein YczE. | Putative stress-induced transcription regulator. | 0.477 |