Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCE63899.1 | SCE65225.1 | GA0070561_0422 | GA0070561_0580 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Threonine synthase. | 0.829 |
SCE63899.1 | SCE67111.1 | GA0070561_0422 | GA0070561_0740 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Threonine dehydratase. | 0.825 |
SCE63899.1 | SCE67836.1 | GA0070561_0422 | GA0070561_0793 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Threonine dehydratase. | 0.825 |
SCE63899.1 | SCE73243.1 | GA0070561_0422 | GA0070561_1216 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.993 |
SCE63899.1 | SCF21597.1 | GA0070561_0422 | GA0070561_4350 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | L-threonine synthase. | 0.829 |
SCE63899.1 | SCF23747.1 | GA0070561_0422 | GA0070561_4562 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.677 |
SCE63899.1 | SCF32774.1 | GA0070561_0422 | GA0070561_5396 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.829 |
SCE63899.1 | SCF32780.1 | GA0070561_0422 | GA0070561_5397 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Homoserine dehydrogenase. | 0.896 |
SCE63899.1 | SCF39684.1 | GA0070561_0422 | GA0070561_6198 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | L-threonine aldolase. | 0.575 |
SCE63899.1 | thrB | GA0070561_0422 | GA0070561_5392 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.830 |
SCE65225.1 | SCE63899.1 | GA0070561_0580 | GA0070561_0422 | Threonine synthase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.829 |
SCE65225.1 | SCE67111.1 | GA0070561_0580 | GA0070561_0740 | Threonine synthase. | Threonine dehydratase. | 0.799 |
SCE65225.1 | SCE67836.1 | GA0070561_0580 | GA0070561_0793 | Threonine synthase. | Threonine dehydratase. | 0.919 |
SCE65225.1 | SCE73243.1 | GA0070561_0580 | GA0070561_1216 | Threonine synthase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.907 |
SCE65225.1 | SCF21597.1 | GA0070561_0580 | GA0070561_4350 | Threonine synthase. | L-threonine synthase. | 0.765 |
SCE65225.1 | SCF23747.1 | GA0070561_0580 | GA0070561_4562 | Threonine synthase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.797 |
SCE65225.1 | SCF32774.1 | GA0070561_0580 | GA0070561_5396 | Threonine synthase. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.777 |
SCE65225.1 | SCF32780.1 | GA0070561_0580 | GA0070561_5397 | Threonine synthase. | Homoserine dehydrogenase. | 0.928 |
SCE65225.1 | SCF39684.1 | GA0070561_0580 | GA0070561_6198 | Threonine synthase. | L-threonine aldolase. | 0.888 |
SCE65225.1 | thrB | GA0070561_0580 | GA0070561_5392 | Threonine synthase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.981 |
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