STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF40198.1ABC-type multidrug transport system, ATPase and permease component. (596 aa)    
Predicted Functional Partners:
SCF40192.1
ABC-type multidrug transport system, ATPase and permease component.
 
    
0.857
SCF34884.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.766
SCF21784.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.655
SCE94308.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.588
SCF29468.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.575
SCF40201.1
Protein of unknown function (DUF2470).
  
    0.551
SCE69490.1
ATP-binding cassette, subfamily C, CydC.
  
 
 
0.550
SCE96830.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
  
 
 
0.535
SCF02325.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
 
0.533
SCF34695.1
Sulfate adenylyltransferase.
  
  
  0.524
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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