STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF40770.1Glyoxylase, beta-lactamase superfamily II. (217 aa)    
Predicted Functional Partners:
SCF40778.1
Maleylpyruvate isomerase.
       0.827
SCF14248.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.703
SCF19637.1
Adenylyltransferase and sulfurtransferase.
 
  0.685
rsgA-2
Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.573
SCF29468.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.455
SCF35842.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.446
SCE81071.1
Rhodanese-related sulfurtransferase.
  
  0.444
SCF23511.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.425
SCF37357.1
Rhodanese-related sulfurtransferase.
  
  0.421
SCF38555.1
Sugar-specific transcriptional regulator TrmB.
    
   0.410
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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