STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_00164Succinate-semialdehyde dehydrogenase, putative. (499 aa)    
Predicted Functional Partners:
PISL3812_05688
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase.
  
 0.789
PISL3812_03321
Citrate synthase; Belongs to the citrate synthase family.
   
 0.713
PISL3812_04395
Citrate synthase; Belongs to the citrate synthase family.
   
 0.713
PISL3812_00016
Tryptophan synthase.
  
 
 0.707
PISL3812_08936
Tryptophan synthase.
  
 
 0.707
PISL3812_09331
Aspartate aminotransferase.
    
 0.705
citA
Citrate synthase; Belongs to the citrate synthase family.
   
 0.702
PISL3812_05302
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 0.698
PISL3812_09193
Uncharacterized protein.
  
 0.696
PISL3812_07200
Ornithine aminotransferase.
 
 0.674
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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