STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_00840Opsin-1. (304 aa)    
Predicted Functional Partners:
PISL3812_00839
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.602
PISL3812_03403
Uncharacterized protein.
    
 
 0.533
PISL3812_07099
Uncharacterized protein.
    
 
 0.524
PISL3812_03102
G_PROTEIN_RECEP_F2_4 domain-containing protein.
      
 0.495
PISL3812_02428
Putative membrane protein YOL092W.
      
 0.495
PISL3812_04295
Putative membrane protein YOL092W.
      
 0.495
PISL3812_03660
Cyclic AMP receptor 2.
      
 0.495
PISL3812_08633
UV DNA damage endonuclease.
    
 0.471
PISL3812_00292
Retinol dehydrogenase 14; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.430
PISL3812_00346
Uncharacterized protein.
   
  0.430
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.