STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_01105Uncharacterized protein. (391 aa)    
Predicted Functional Partners:
PISL3812_06070
Chromosome transmission fidelity protein 18.
   
 0.999
PISL3812_09312
Uncharacterized protein.
   
 0.999
PISL3812_05986
Replication factor C subunit 5.
   
 0.990
POL2
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.975
PISL3812_05301
Endo-chitosanase; Chitosanase catalyzing the endo-type cleavage of chitosan, the deacylated form of chitin. Chitosanase may be crucial in the degradation of the deacetylated portion of chitin in the fungal cell wall.
   
 0.967
PISL3812_05796
Replication factor C subunit 4.
   
 0.966
PISL3812_09432
Replication factor C subunit 3.
   
 0.958
PISL3812_05213
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.898
PISL3812_01020
DNA polymerase.
   
 0.880
PISL3812_06933
Cell cycle checkpoint protein RAD17.
   
 0.873
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.