STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_00227Aspartate-semialdehyde dehydrogenase. (362 aa)    
Predicted Functional Partners:
PISL3812_05573
Aspartokinase.
 
 0.995
PISL3812_02997
Homoserine dehydrogenase.
  
 0.981
PISL3812_05945
N-acetyl-gamma-glutamyl-phosphate reductase / acetylglutamate kinase.
 
 
 0.966
pgkA
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.934
PISL3812_02474
Acetolactate synthase I/III small subunit.
  
 
 0.930
gpdA
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.886
PISL3812_06323
Histidine biosynthesis trifunctional protein.
  
  
 0.876
ACC1
Biotin carboxylase.
     
 0.857
trpC
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
  
 0.816
PISL3812_05055
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.815
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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