STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_00945Uncharacterized protein. (627 aa)    
Predicted Functional Partners:
PISL3812_08597
Uncharacterized protein.
 
      0.899
PISL3812_02688
Titin.
    
 0.549
PISL3812_01929
Pre-mRNA-splicing factor srp1.
    
 0.513
PISL3812_03442
Pre-mRNA-splicing factor srp2.
    
 0.513
PISL3812_07636
Pre-mRNA-splicing factor cef1.
    
   0.489
PISL3812_01729
U1 small nuclear ribonucleoprotein 70 kDa homolog.
    
 0.433
PISL3812_01870
RRM domain-containing protein.
    
 0.417
PISL3812_09418
RNA-binding post-transcriptional regulator cip2.
    
 0.417
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.