STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_01031E3 ubiquitin-protein ligase RAD18. (441 aa)    
Predicted Functional Partners:
PISL3812_07404
Vezatin domain-containing protein.
   
 0.990
PISL3812_09343
Polyubiquitin-A.
    
 0.960
PISL3812_02235
DNA repair protein rhp51; Belongs to the RecA family.
   
 
 0.956
PISL3812_05085
DNA helicase II / ATP-dependent DNA helicase PcrA.
    
 
 0.944
PISL3812_07320
Ubiquitin-60S ribosomal protein L40.
    
  0.937
PISL3812_07685
Uncharacterized protein.
   
 0.925
PISL3812_00235
DNA polymerase.
    
 0.906
PISL3812_03231
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.905
PISL3812_00357
N-acetyltransferase.
   
 
 0.886
PISL3812_04722
UmuC domain-containing protein.
   
 
 0.886
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.