STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_0169854S ribosomal protein yml6, mitochondrial. (289 aa)    
Predicted Functional Partners:
PISL3812_02400
37S ribosomal protein mrp4, mitochondrial.
 
 0.998
PISL3812_02716
Uncharacterized protein.
  
 0.998
PISL3812_05179
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.998
PISL3812_01598
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
  
 0.997
PISL3812_02590
54S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
 
 0.997
PISL3812_03785
54S ribosomal protein L23, mitochondrial.
  
 0.997
PISL3812_07667
37S ribosomal protein S12, mitochondrial.
  
 0.997
PISL3812_09597
Uncharacterized protein.
   
 0.997
PISL3812_00449
Large subunit ribosomal protein L15.
  
 0.996
PISL3812_02334
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.996
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.