STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_01752Ribosome biogenesis protein enp2 homolog. (746 aa)    
Predicted Functional Partners:
PISL3812_01303
Ribosome biogenesis protein BMS1.
   
 
 0.998
PISL3812_00618
U3 small nucleolar RNA-associated protein 22.
   
 
 0.997
PISL3812_03872
KH domain-containing protein.
   
 
 0.997
PISL3812_05760
U3 small nucleolar RNA-associated protein 21.
   
 
 0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.997
PISL3812_04434
Periodic tryptophan protein 2 homolog.
   
 
 0.996
PISL3812_05742
Essential nuclear protein 1.
   
 
 0.996
PISL3812_07960
Protein bfr2.
   
 
 0.996
PISL3812_08624
Uncharacterized protein.
   
 
 0.996
PISL3812_07337
Uncharacterized protein.
   
 
 0.995
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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