STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_00995Xylanolytic transcriptional activator xlnR. (539 aa)    
Predicted Functional Partners:
PISL3812_05916
ANK_REP_REGION domain-containing protein.
   
  0.569
PISL3812_09156
Uncharacterized protein.
    
  0.546
PISL3812_03940
Uncharacterized protein.
    
 0.515
PISL3812_06607
SH3 domain-containing protein.
    
  0.481
PISL3812_04841
RanBD1 domain-containing protein.
    
  0.472
PISL3812_05613
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.472
PISL3812_00741
Signaling protein YkoW.
    
  0.454
PISL3812_00972
Uncharacterized protein.
     
 0.444
PISL3812_04896
Shikimate_DH domain-containing protein.
     
 0.444
PISL3812_06952
Quinate repressor protein.
     
 0.444
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.