STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_01691Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (261 aa)    
Predicted Functional Partners:
PISL3812_01027
Transport protein particle subunit trs85-2.
    
 0.999
PISL3812_02607
Uncharacterized protein.
   
 0.999
PISL3812_03239
Transport protein particle subunit trs120.
    
 0.999
bet5
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
PISL3812_07584
Uncharacterized protein.
    
 0.999
PISL3812_08806
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
PISL3812_02658
DmX-like protein 1.
    
 0.998
PISL3812_02541
Uncharacterized protein.
    
 0.993
PISL3812_00639
Uncharacterized protein.
    
 0.989
PISL3812_05775
Trafficking protein particle complex subunit 6B.
    
 0.984
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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