STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_02150Protein SSD1. (1347 aa)    
Predicted Functional Partners:
PISL3812_01722
Uncharacterized protein.
   
 0.974
PISL3812_07598
Exosome complex component rrp45.
   
 0.973
PISL3812_02722
KH_dom_type_1 domain-containing protein.
   
 0.971
PISL3812_03199
RNase_PH domain-containing protein.
   
 0.971
PISL3812_05119
Exosome complex component RRP41.
   
 0.971
PISL3812_03023
Exosome complex subunit Rrp46, putative.
   
 0.970
PISL3812_00925
Exosome complex component RRP4.
   
 0.969
PISL3812_01097
Exosome complex component MTR3, fungi type.
   
 0.967
PISL3812_01441
HBS1-like protein.
   
 0.966
PISL3812_08916
Exosome complex component RRP42.
   
 0.966
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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