PISL3812_02021 protein (Talaromyces islandicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PISL3812_02021

Uncharacterized protein. (840 aa)

Predicted Functional Partners:

PISL3812_03201

0.991

PISL3812_02311

0.987

PISL3812_02840

0.905

PISL3812_04199

0.905

PISL3812_07155

0.839

PISL3812_02023

0.830

PISL3812_00536

0.763

PISL3812_02552

0.763

PISL3812_02168

0.763

PISL3812_05576

0.750

Your Current Organism:

Talaromyces islandicus

NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PISL3812_00536	PISL3812_02021	A0A0U1LLA7	A0A0U1LQZ5	Uncharacterized protein.	Uncharacterized protein.	0.763
PISL3812_00536	PISL3812_02311	A0A0U1LLA7	A0A0U1LPJ9	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.731
PISL3812_00536	PISL3812_05576	A0A0U1LLA7	A0A0U1LZ07	Uncharacterized protein.	60S ribosomal protein L25.	0.482
PISL3812_02021	PISL3812_00536	A0A0U1LQZ5	A0A0U1LLA7	Uncharacterized protein.	Uncharacterized protein.	0.763
PISL3812_02021	PISL3812_02023	A0A0U1LQZ5	A0A0U1LPE3	Uncharacterized protein.	Formamidopyrimidine-DNA glycosylase.	0.830
PISL3812_02021	PISL3812_02168	A0A0U1LQZ5	A0A0U1LQX5	Uncharacterized protein.	Uncharacterized protein.	0.763
PISL3812_02021	PISL3812_02311	A0A0U1LQZ5	A0A0U1LPJ9	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.987
PISL3812_02021	PISL3812_02552	A0A0U1LQZ5	A0A0U1LQ76	Uncharacterized protein.	Uncharacterized protein.	0.763
PISL3812_02021	PISL3812_02840	A0A0U1LQZ5	A0A0U1LR12	Uncharacterized protein.	Uncharacterized protein.	0.905
PISL3812_02021	PISL3812_03201	A0A0U1LQZ5	A0A0U1LS42	Uncharacterized protein.	Uncharacterized protein.	0.991
PISL3812_02021	PISL3812_04199	A0A0U1LQZ5	A0A0U1LVQ8	Uncharacterized protein.	Pre-mRNA-splicing factor cwc24.	0.905
PISL3812_02021	PISL3812_05576	A0A0U1LQZ5	A0A0U1LZ07	Uncharacterized protein.	60S ribosomal protein L25.	0.750
PISL3812_02021	PISL3812_07155	A0A0U1LQZ5	A0A0U1M3L3	Uncharacterized protein.	Uncharacterized protein.	0.839
PISL3812_02023	PISL3812_02021	A0A0U1LPE3	A0A0U1LQZ5	Formamidopyrimidine-DNA glycosylase.	Uncharacterized protein.	0.830
PISL3812_02168	PISL3812_02021	A0A0U1LQX5	A0A0U1LQZ5	Uncharacterized protein.	Uncharacterized protein.	0.763
PISL3812_02168	PISL3812_02311	A0A0U1LQX5	A0A0U1LPJ9	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.731
PISL3812_02168	PISL3812_05576	A0A0U1LQX5	A0A0U1LZ07	Uncharacterized protein.	60S ribosomal protein L25.	0.482
PISL3812_02311	PISL3812_00536	A0A0U1LPJ9	A0A0U1LLA7	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.731
PISL3812_02311	PISL3812_02021	A0A0U1LPJ9	A0A0U1LQZ5	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.987
PISL3812_02311	PISL3812_02168	A0A0U1LPJ9	A0A0U1LQX5	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.731

page 1 of 3

Server load: low (14%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Neighborhood

© STRING Consortium 2023

Credits

Access

Info

About