STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_04192RTC domain-containing protein. (503 aa)    
Predicted Functional Partners:
PISL3812_01890
Putative U3 small nucleolar RNA-associated protein 18.
   
 0.989
PISL3812_05077
U3 small nucleolar RNA-associated protein 4.
   
 0.988
PISL3812_00618
U3 small nucleolar RNA-associated protein 22.
   
 0.985
PISL3812_09318
U3 small nucleolar RNA-associated protein 5.
   
 0.984
PISL3812_01303
Ribosome biogenesis protein BMS1.
   
 0.983
PISL3812_04434
Periodic tryptophan protein 2 homolog.
   
 
 0.983
PISL3812_05170
WD_REPEATS_REGION domain-containing protein.
   
 0.983
PISL3812_08554
U3 small nucleolar RNA-associated protein 17.
   
 0.982
PISL3812_07541
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 0.980
FCF1
rRNA-processing protein FCF1 homolog.
   
 0.979
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.