STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_04899PLD phosphodiesterase domain-containing protein. (536 aa)    
Predicted Functional Partners:
PISL3812_03315
2-methylcitrate dehydratase.
 
   
  0.795
prpD
2-methylcitrate dehydratase.
 
   
  0.789
PISL3812_07359
C-8 sterol isomerase.
   
 0.603
PISL3812_01582
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.590
PISL3812_05948
Ribosome biogenesis protein tsr1 homolog.
   
  0.574
PISL3812_05742
Essential nuclear protein 1.
   
  0.571
PISL3812_00828
Farnesyl-diphosphate farnesyltransferase.
   
 0.561
PISL3812_04101
Protein LTV1.
   
  0.556
PISL3812_09299
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.556
PISL3812_02901
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.555
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.