STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_04736Putative histone deacetylase complex subunit cti6. (622 aa)    
Predicted Functional Partners:
PISL3812_05159
Histone deacetylase 1/2.
    
 0.897
PISL3812_08697
FAS1 domain-containing protein AFUA_8G05360.
    
 0.883
PISL3812_02659
RXT2_N domain-containing protein.
    
 
 0.878
PISL3812_05964
Uncharacterized protein.
    
 
 0.801
PISL3812_02894
Chromatin modification-related protein.
   
 
 0.781
PISL3812_07460
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase.
    
 0.774
PISL3812_01957
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.759
PISL3812_02689
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.759
PISL3812_07637
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.759
PISL3812_09221
Uncharacterized protein.
    
 
 0.737
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.