STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_06442GAT domain-containing protein. (437 aa)    
Predicted Functional Partners:
PISL3812_03346
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.728
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.543
PISL3812_08558
GTP-binding protein ypt4.
    
  0.537
PISL3812_02816
Mannose 6-phosphate receptor-like protein 1.
    
 
 0.482
PISL3812_02120
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.459
addA
ATP-dependent helicase/nuclease subunit A.
    
 0.459
PISL3812_01065
Respiration factor 2.
  
     0.427
PISL3812_03791
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.419
PISL3812_07320
Ubiquitin-60S ribosomal protein L40.
    
   0.403
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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