STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_06903TPR repeat protein oca3. (313 aa)    
Predicted Functional Partners:
PISL3812_04708
ER membrane protein complex subunit 1.
   
 0.991
PISL3812_08696
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
   
 
 0.991
PISL3812_03773
Uncharacterized protein.
   
 
 0.989
PISL3812_06631
Uncharacterized protein.
   
 
 0.955
PISL3812_08538
Uncharacterized protein.
    
 
 0.954
PISL3812_02154
Uncharacterized protein.
    
 
 0.945
PISL3812_02900
Dynactin subunit 4.
    
 
 0.915
PISL3812_06902
Uncharacterized protein.
 
  
   0.866
PISL3812_05856
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.630
PISL3812_00499
Uncharacterized protein.
   
 
 0.535
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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