STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_06781Endoglucanase-4. (970 aa)    
Predicted Functional Partners:
PISL3812_04441
Guanine nucleotide-binding protein subunit beta-like protein.
    
   0.857
PISL3812_00226
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
    
   0.830
PISL3812_02803
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.820
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
 
 0.814
PISL3812_03645
40S ribosomal protein S13-1.
    
 
 0.754
PISL3812_00842
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.751
PISL3812_08101
40S ribosomal protein S20.
    
   0.751
PISL3812_09240
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.751
PISL3812_01927
Glutamate-5-semialdehyde dehydrogenase.
    
  0.728
PISL3812_00195
40S ribosomal protein S9.
    
   0.725
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.