STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_08400Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
PISL3812_07710
tRNA pseudouridine synthase B.
   
 0.852
PISL3812_05582
H/ACA ribonucleoprotein complex subunit 4.
   
 0.833
PISL3812_02334
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.810
trpC
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
     
 0.773
PISL3812_01567
DNA-directed RNA Polymerase III subunit C5.
  
  
 0.756
PISL3812_08912
DNA-directed RNA polymerase II subunit RPB3.
  
  
 0.756
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.723
PISL3812_03323
Uncharacterized protein.
  
   0.711
PISL3812_02171
Ribosomal RNA-processing protein 1 homolog.
   
    0.695
PISL3812_06213
TRUD domain-containing protein.
   
 
 0.670
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.