STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_08134RNase H domain-containing protein. (360 aa)    
Predicted Functional Partners:
PISL3812_00289
Cell surface glycoprotein 1; Belongs to the complex I LYR family.
    
 0.681
PISL3812_01592
Glycerophosphodiester phosphodiesterase GDE1.
    
  0.676
PISL3812_00196
60S ribosomal protein L21-A.
   
   0.661
PISL3812_07320
Ubiquitin-60S ribosomal protein L40.
    
  0.650
PISL3812_02846
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.619
PISL3812_02052
54S ribosomal protein RML2, mitochondrial.
   
 
 0.613
PISL3812_05786
Mitochondrial import receptor subunit tom-40.
    
  0.607
PISL3812_05158
26S proteasome regulatory subunit rpn11.
    
  0.597
PISL3812_06208
NLPC_P60 domain-containing protein.
    
  0.597
PISL3812_04116
60S ribosomal protein L2.
   
 
 0.587
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.