STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_09358COesterase domain-containing protein. (212 aa)    
Predicted Functional Partners:
PISL3812_09359
COesterase domain-containing protein.
 
      0.898
PISL3812_01592
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.803
PISL3812_01061
Uncharacterized protein.
    
  0.708
niaD
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.708
PISL3812_07771
U3 small nucleolar RNA-associated protein 20.
   
  0.545
PISL3812_00355
Ribosomal RNA small subunit methyltransferase NEP1.
    
  0.523
PISL3812_02901
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.523
PISL3812_03872
KH domain-containing protein.
    
  0.523
FCF1
rRNA-processing protein FCF1 homolog.
    
  0.523
PISL3812_06326
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.523
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.