STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_09287Disintegrin and metalloproteinase domain-containing protein B. (813 aa)    
Predicted Functional Partners:
PISL3812_09863
Protein scd2/ral3.
    
  0.703
PISL3812_02527
Uncharacterized protein.
    
  0.594
PISL3812_02634
GRIP domain-containing protein RUD3.
    
  0.594
GUK1
Guanylate kinase.
    
  0.594
PISL3812_07989
Guanylate kinase.
    
  0.594
PISL3812_09288
DNA polymerase iota subunit.
 
      0.565
PISL3812_04635
RAS protein activator like-3.
    
  0.554
PISL3812_02120
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.477
addA
ATP-dependent helicase/nuclease subunit A.
    
 0.470
kexB
Pheromone processing endoprotease Kex2; Belongs to the peptidase S8 family.
    
 0.455
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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