Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KIY23602.1Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)    
Predicted Functional Partners:
KIY23601.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.697
KIY23603.1
Cytosolic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
KIY23604.1
Cytosolic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
KIY23605.1
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
KIY23606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
KIY23893.1
Amylopullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
  0.466
KIY23460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.466
KIY23462.1
Sugar phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.466
KIY23467.1
Oligo-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.466
KIY23468.1
Oligo-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.466
Your Current Organism:
Bacillus subterraneus
NCBI taxonomy Id: 285983
Other names: ATCC BAA-136, B. subterraneus, Bacillus subterraneus Kanso et al. 2002, DSM 13966, strain COOI3B
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