STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIY22749.1Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)    
Predicted Functional Partners:
cwlD
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.884
KIY23092.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.825
KIY21118.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.783
KIY21964.1
Stage III sporulation protein AH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
cotE
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
gerQ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
KIY21731.1
Spore gernimation protein GerD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
KIY22048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
KIY21309.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
KIY23314.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.767
Your Current Organism:
Bacillus subterraneus
NCBI taxonomy Id: 285983
Other names: ATCC BAA-136, B. subterraneus, Bacillus subterraneus Kanso et al. 2002, DSM 13966, strain COOI3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.