STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntPMembrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. (180 aa)    
Predicted Functional Partners:
dpaA
Dipicolinate synthase subunit A; Catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
KIY22479.1
tRNA threonylcarbamoyladenosine biosynthesis protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
  
    0.586
KIY22477.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.570
ytaF
Membrane protein; Probably functions as a manganese efflux pump.
  
     0.539
spoIIE
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
KIY21952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.459
yabQ
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
KIY22487.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
KIY22390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
KIY21379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.402
Your Current Organism:
Bacillus subterraneus
NCBI taxonomy Id: 285983
Other names: ATCC BAA-136, B. subterraneus, Bacillus subterraneus Kanso et al. 2002, DSM 13966, strain COOI3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.