SeMB42_g07667 protein (Synchytrium endobioticum)

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SeMB42_g07667

CYCLIN domain-containing protein; Belongs to the cyclin family. (273 aa)

Predicted Functional Partners:

SeMB42_g05404

0.923

SeMB42_g03637

0.923

SENM603

0.891

SeMB42_g05087

0.830

SeMB42_g01724

0.812

SeMB42_g04451

0.787

SeMB42_g02473

0.770

MED20

0.760

SeMB42_g07020

0.760

SeMB42_g06012

0.745

Your Current Organism:

Synchytrium endobioticum

NCBI taxonomy Id: 286115
Other names: S. endobioticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MED20	SeMB42_g01724	A0A507CFR9	A0A507DM81	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Uncharacterized protein.	0.675
MED20	SeMB42_g02473	A0A507CFR9	A0A507CG20	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Spt4 domain-containing protein.	0.940
MED20	SeMB42_g03637	A0A507CFR9	A0A507D5L3	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Protein kinase domain-containing protein.	0.848
MED20	SeMB42_g05087	A0A507CFR9	A0A507CU37	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.952
MED20	SeMB42_g05404	A0A507CFR9	A0A507CRM9	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Protein kinase domain-containing protein.	0.848
MED20	SeMB42_g06012	A0A507CFR9	A0A507CMP6	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Protein kinase domain-containing protein.	0.646
MED20	SeMB42_g07667	A0A507CFR9	A0A507BQ49	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.760
SENM603	SeMB42_g01724	A0A507DQU6	A0A507DM81	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.778
SENM603	SeMB42_g02473	A0A507DQU6	A0A507CG20	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Spt4 domain-containing protein.	0.997
SENM603	SeMB42_g03637	A0A507DQU6	A0A507D5L3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Protein kinase domain-containing protein.	0.949
SENM603	SeMB42_g04451	A0A507DQU6	A0A507CY07	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.419
SENM603	SeMB42_g05087	A0A507DQU6	A0A507CU37	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.997
SENM603	SeMB42_g05404	A0A507DQU6	A0A507CRM9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Protein kinase domain-containing protein.	0.949
SENM603	SeMB42_g06012	A0A507DQU6	A0A507CMP6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Protein kinase domain-containing protein.	0.942
SENM603	SeMB42_g07667	A0A507DQU6	A0A507BQ49	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.891
SeMB42_g01724	MED20	A0A507DM81	A0A507CFR9	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.675
SeMB42_g01724	SENM603	A0A507DM81	A0A507DQU6	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.778
SeMB42_g01724	SeMB42_g02473	A0A507DM81	A0A507CG20	Uncharacterized protein.	Spt4 domain-containing protein.	0.769
SeMB42_g01724	SeMB42_g03637	A0A507DM81	A0A507D5L3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.531
SeMB42_g01724	SeMB42_g05087	A0A507DM81	A0A507CU37	Uncharacterized protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.797