STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g07260Calponin-homology (CH) domain-containing protein. (788 aa)    
Predicted Functional Partners:
SeMB42_g05407
Uncharacterized protein.
   
 0.858
SeMB42_g03292
Uncharacterized protein.
   
 0.843
SeMB42_g06490
Uncharacterized protein.
   
 0.792
SeMB42_g06211
Uncharacterized protein.
   
 0.787
SeMB42_g02350
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.787
SeMB42_g04817
Uncharacterized protein.
   
 0.768
SeMB42_g06492
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.735
SeMB42_g04338
Uncharacterized protein; Belongs to the actin family.
   
 0.732
SeMB42_g05560
Uncharacterized protein.
    
 0.729
SeMB42_g02768
Uncharacterized protein; Belongs to the actin family.
    
 0.729
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.