STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g06097Uncharacterized protein. (498 aa)    
Predicted Functional Partners:
SeMB42_g03157
CAP-Gly domain-containing protein.
   
 0.999
SeMB42_g05570
Uncharacterized protein.
   
 0.994
SeMB42_g05056
Uncharacterized protein; Belongs to the actin family.
   
 0.993
SeMB42_g02401
Uncharacterized protein.
    
 0.992
SeMB42_g04070
Uncharacterized protein.
    
 0.989
SeMB42_g06702
WD_REPEATS_REGION domain-containing protein.
    
 0.986
SeMB42_g06492
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.980
SeMB42_g03189
Uncharacterized protein.
   
 0.951
SeMB42_g05560
Uncharacterized protein.
   
 0.945
SeMB42_g02768
Uncharacterized protein; Belongs to the actin family.
   
 0.945
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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