STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g06509Cytochrome b5 heme-binding domain-containing protein. (476 aa)    
Predicted Functional Partners:
SeMB42_g03367
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.809
SeMB42_g02351
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.695
SeMB42_g02157
Amino_oxidase domain-containing protein.
    
 0.669
SeMB42_g02049
PKS_ER domain-containing protein.
    
 0.655
SeMB42_g03133
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 
 0.621
SeMB42_g04020
Uncharacterized protein.
    
 0.620
TAH18
NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of DRE2. Positively controls H(2)O(2)-induced cell death; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
 0.612
SeMB42_g03147
Uncharacterized protein.
     
 0.608
SeMB42_g01804
ADH_N domain-containing protein.
     
 0.605
SeMB42_g07299
Uncharacterized protein.
    
 0.604
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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