STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g06263Uncharacterized protein. (697 aa)    
Predicted Functional Partners:
SeMB42_g03736
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.991
SeMB42_g06336
Uncharacterized protein.
    
 0.982
SeMB42_g02438
Uncharacterized protein.
   
 0.982
SeMB42_g01159
Uncharacterized protein.
    
 0.931
SeMB42_g05903
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.737
SeMB42_g07615
Pep3_Vps18 domain-containing protein.
    
 
 0.656
SeMB42_g04554
Uncharacterized protein.
     
 0.621
SeMB42_g03800
E3 ubiquitin-protein ligase PEP5.
    
 
 0.603
SeMB42_g00968
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 
 0.571
SeMB42_g02324
Uncharacterized protein.
    
 0.561
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.