STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g07585PIPK domain-containing protein. (678 aa)    
Predicted Functional Partners:
SeMB42_g00471
RBR-type E3 ubiquitin transferase.
 
  
   0.901
SeMB42_g04801
Uncharacterized protein.
   
 0.893
SeMB42_g04890
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.891
SeMB42_g06769
1-phosphatidylinositol 4-kinase; Belongs to the PI3/PI4-kinase family.
   
 0.852
PLC1
Phosphoinositide phospholipase C.
    
 0.847
SeMB42_g03054
FERM domain-containing protein.
    
 0.828
SeMB42_g03511
Uncharacterized protein.
   
 0.820
SeMB42_g04173
SAC domain-containing protein.
    
 0.819
SeMB42_g06929
PI3K/PI4K domain-containing protein.
     
 0.802
SeMB42_g01300
VWFA domain-containing protein.
 
   
 0.776
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.