Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SeMB42_g00356 | SeMB42_g00518 | A0A507DRX3 | A0A507DJD6 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.974 |
SeMB42_g00356 | SeMB42_g03978 | A0A507DRX3 | A0A507CNN1 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.852 |
SeMB42_g00356 | SeMB42_g05948 | A0A507DRX3 | A0A507CN54 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.454 |
SeMB42_g00356 | SeMB42_g06304 | A0A507DRX3 | A0A507CQY0 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
SeMB42_g00356 | SeMB42_g06837 | A0A507DRX3 | A0A507C9U9 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Sm domain-containing protein. | 0.999 |
SeMB42_g00518 | SeMB42_g00356 | A0A507DJD6 | A0A507DRX3 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.974 |
SeMB42_g00518 | SeMB42_g01731 | A0A507DJD6 | A0A507DCF9 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Nop domain-containing protein. | 0.999 |
SeMB42_g00518 | SeMB42_g03978 | A0A507DJD6 | A0A507CNN1 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.941 |
SeMB42_g00518 | SeMB42_g04856 | A0A507DJD6 | A0A507CTW8 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Uncharacterized protein. | 0.999 |
SeMB42_g00518 | SeMB42_g05840 | A0A507DJD6 | A0A507CP17 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | RRM domain-containing protein. | 0.857 |
SeMB42_g00518 | SeMB42_g05948 | A0A507DJD6 | A0A507CN54 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Uncharacterized protein. | 0.431 |
SeMB42_g00518 | SeMB42_g06304 | A0A507DJD6 | A0A507CQY0 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Small nuclear ribonucleoprotein Sm D2. | 0.971 |
SeMB42_g00518 | SeMB42_g06837 | A0A507DJD6 | A0A507C9U9 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Sm domain-containing protein. | 0.976 |
SeMB42_g01731 | SeMB42_g00518 | A0A507DCF9 | A0A507DJD6 | Nop domain-containing protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
SeMB42_g01731 | SeMB42_g03978 | A0A507DCF9 | A0A507CNN1 | Nop domain-containing protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.994 |
SeMB42_g01731 | SeMB42_g04113 | A0A507DCF9 | A0A507D1F4 | Nop domain-containing protein. | Uncharacterized protein. | 0.404 |
SeMB42_g01731 | SeMB42_g04856 | A0A507DCF9 | A0A507CTW8 | Nop domain-containing protein. | Uncharacterized protein. | 0.999 |
SeMB42_g01731 | SeMB42_g05711 | A0A507DCF9 | A0A507D1U8 | Nop domain-containing protein. | Uncharacterized protein. | 0.438 |
SeMB42_g01731 | SeMB42_g05840 | A0A507DCF9 | A0A507CP17 | Nop domain-containing protein. | RRM domain-containing protein. | 0.826 |
SeMB42_g01731 | SeMB42_g05948 | A0A507DCF9 | A0A507CN54 | Nop domain-containing protein. | Uncharacterized protein. | 0.433 |
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