STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g05913YL1_C domain-containing protein. (779 aa)    
Predicted Functional Partners:
SeMB42_g04050
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.981
SeMB42_g01787
Uncharacterized protein.
    
 0.980
SeMB42_g03094
SANT_DAMP1_like domain-containing protein.
    
 0.979
SeMB42_g06662
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.979
SeMB42_g04986
Phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating).
    
 0.978
SeMB42_g00845
Uncharacterized protein.
   
 0.973
SeMB42_g00107
Ribosomal_L28e domain-containing protein; Belongs to the actin family.
    
 0.969
SeMB42_g02343
Histone H2A; Belongs to the histone H2A family.
    
 
 0.965
SeMB42_g02387
Uncharacterized protein.
    
 0.962
SeMB42_g04617
HIT-type domain-containing protein.
    
 
 0.951
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.