STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g05468Peptidase C50 domain-containing protein. (2068 aa)    
Predicted Functional Partners:
SeMB42_g02425
Serine/threonine-protein kinase.
   
 0.991
SeMB42_g00704
Protein kinase domain-containing protein.
   
 0.978
SeMB42_g06810
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.959
SeMB42_g03310
Uncharacterized protein.
   
 0.953
SeMB42_g06137
Uncharacterized protein.
   
 0.928
SeMB42_g00124
Structural maintenance of chromosomes protein.
   
 0.924
SeMB42_g03580
Uncharacterized protein.
   
 
 0.923
SeMB42_g00143
Uncharacterized protein.
   
 0.917
SeMB42_g05778
Structural maintenance of chromosomes protein.
   
 0.906
SeMB42_g03675
DUF5595 domain-containing protein.
   
 
 0.899
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.